PhytophthoraV1, Main, Exploration, bibRecord, 000684

QTL analysis reveals quantitative resistant loci for Phytophthora infestans and Tecia solanivora in tetraploid potato (Solanum tuberosum L.).

Identifieur interne : 000684 ( Main/Exploration ); précédent : 000683; suivant : 000685

QTL analysis reveals quantitative resistant loci for Phytophthora infestans and Tecia solanivora in tetraploid potato (Solanum tuberosum L.).

Auteurs : Juan David Santa [Colombie] ; Jhon Berdugo-Cely [Colombie] ; Liliana Cely-Pardo [Colombie] ; Mauricio Soto-Suárez [Colombie] ; Teresa Mosquera [Colombie] ; Carlos H. Galeano M [Colombie]

Source :

PloS one [ 1932-6203 ] ; 2018.

RBID : pubmed:29979690

Descripteurs français

KwdFr :
- Animaux (MeSH), Cartographie chromosomique (MeSH), Immunité innée (génétique), Immunité innée (immunologie), Locus de caractère quantitatif (MeSH), Maladies des plantes (génétique), Maladies des plantes (immunologie), Maladies des plantes (parasitologie), Papillons de nuit (physiologie), Phytophthora infestans (génétique), Phytophthora infestans (parasitologie), Phénotype (MeSH), Polymorphisme de nucléotide simple (MeSH), Protéines végétales (génétique), Résistance à la maladie (génétique), Solanum tuberosum (croissance et développement), Solanum tuberosum (génétique), Solanum tuberosum (immunologie), Solanum tuberosum (parasitologie), Tétraploïdie (MeSH).
MESH :
- croissance et développement : Solanum tuberosum.
- génétique : Immunité innée, Maladies des plantes, Phytophthora infestans, Protéines végétales, Résistance à la maladie, Solanum tuberosum.
- immunologie : Immunité innée, Maladies des plantes, Solanum tuberosum.
- parasitologie : Maladies des plantes, Phytophthora infestans, Solanum tuberosum.
- physiologie : Papillons de nuit.
- Animaux, Cartographie chromosomique, Locus de caractère quantitatif, Phénotype, Polymorphisme de nucléotide simple, Tétraploïdie.

English descriptors

KwdEn :
- Animals (MeSH), Chromosome Mapping (MeSH), Disease Resistance (genetics), Immunity, Innate (genetics), Immunity, Innate (immunology), Moths (physiology), Phenotype (MeSH), Phytophthora infestans (genetics), Phytophthora infestans (parasitology), Plant Diseases (genetics), Plant Diseases (immunology), Plant Diseases (parasitology), Plant Proteins (genetics), Polymorphism, Single Nucleotide (MeSH), Quantitative Trait Loci (MeSH), Solanum tuberosum (genetics), Solanum tuberosum (growth & development), Solanum tuberosum (immunology), Solanum tuberosum (parasitology), Tetraploidy (MeSH).
MESH :
- chemical , genetics : Plant Proteins.
- genetics : Disease Resistance, Immunity, Innate, Phytophthora infestans, Plant Diseases, Solanum tuberosum.
- growth & development : Solanum tuberosum.
- immunology : Immunity, Innate, Plant Diseases, Solanum tuberosum.
- parasitology : Phytophthora infestans, Plant Diseases, Solanum tuberosum.
- physiology : Moths.
- Animals, Chromosome Mapping, Phenotype, Polymorphism, Single Nucleotide, Quantitative Trait Loci, Tetraploidy.

Abstract

Late blight and Guatemalan potato tuber moth caused by Phytophthora infestans and Tecia solanivora, respectively, are major phytosanitary problems on potato crops in Colombia and Ecuador. Hence, the development of resistant cultivars is an alternative for their control. However, breeding initiatives for durable resistance using molecular tools are limited due to the genome complexity and high heterozygosity in autotetraploid potatoes. To contribute to a better understanding of the genetic basis underlying the resistance to P. infestans and T. solanivora in potato, the aim of this study was to identify QTLs for resistance to P. infestans and T. solanivora using a F1 tetraploid potato segregant population for both traits. Ninety-four individuals comprised this population. Parent genotypes and their progeny were genotyped using SOLCAP 12K potato array. Forty-five percent of the markers were polymorphic. A genetic linkage map was built with a length of 968.4 cM and 1,287 SNPs showing good distribution across the genome. Severity and incidence were evaluated in two crop cycles for two years. QTL analysis revealed six QTLs linked to P. infestans, four of these related to previous QTLs reported, and two novel QTLs (qrAUDPC-3 and qrAUDPC-8). Fifteen QTLs were linked to T. solanivora, being qIPC-6 and qOPA-6.1, and qIPC-10 and qIPC-10.1 stable in two different trials. This study is one of the first to identify QTLs for T. solanivora. As the population employed is a breeding population, results will contribute significantly to breeding programs to select resistant plant material, especially in countries where P. infestans and T. solanivora limit potato production.

DOI: 10.1371/journal.pone.0199716
PubMed: 29979690
PubMed Central: PMC6034811

Affiliations:

Colombie

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 000719
to stream Main, to step Curation: 000719

Le document en format XML

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<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals (MeSH)</term>
<term>Chromosome Mapping (MeSH)</term>
<term>Disease Resistance (genetics)</term>
<term>Immunity, Innate (genetics)</term>
<term>Immunity, Innate (immunology)</term>
<term>Moths (physiology)</term>
<term>Phenotype (MeSH)</term>
<term>Phytophthora infestans (genetics)</term>
<term>Phytophthora infestans (parasitology)</term>
<term>Plant Diseases (genetics)</term>
<term>Plant Diseases (immunology)</term>
<term>Plant Diseases (parasitology)</term>
<term>Plant Proteins (genetics)</term>
<term>Polymorphism, Single Nucleotide (MeSH)</term>
<term>Quantitative Trait Loci (MeSH)</term>
<term>Solanum tuberosum (genetics)</term>
<term>Solanum tuberosum (growth & development)</term>
<term>Solanum tuberosum (immunology)</term>
<term>Solanum tuberosum (parasitology)</term>
<term>Tetraploidy (MeSH)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>Animaux (MeSH)</term>
<term>Cartographie chromosomique (MeSH)</term>
<term>Immunité innée (génétique)</term>
<term>Immunité innée (immunologie)</term>
<term>Locus de caractère quantitatif (MeSH)</term>
<term>Maladies des plantes (génétique)</term>
<term>Maladies des plantes (immunologie)</term>
<term>Maladies des plantes (parasitologie)</term>
<term>Papillons de nuit (physiologie)</term>
<term>Phytophthora infestans (génétique)</term>
<term>Phytophthora infestans (parasitologie)</term>
<term>Phénotype (MeSH)</term>
<term>Polymorphisme de nucléotide simple (MeSH)</term>
<term>Protéines végétales (génétique)</term>
<term>Résistance à la maladie (génétique)</term>
<term>Solanum tuberosum (croissance et développement)</term>
<term>Solanum tuberosum (génétique)</term>
<term>Solanum tuberosum (immunologie)</term>
<term>Solanum tuberosum (parasitologie)</term>
<term>Tétraploïdie (MeSH)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Plant Proteins</term>
</keywords>
<keywords scheme="MESH" qualifier="croissance et développement" xml:lang="fr"><term>Solanum tuberosum</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Disease Resistance</term>
<term>Immunity, Innate</term>
<term>Phytophthora infestans</term>
<term>Plant Diseases</term>
<term>Solanum tuberosum</term>
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<keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Solanum tuberosum</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Immunité innée</term>
<term>Maladies des plantes</term>
<term>Phytophthora infestans</term>
<term>Protéines végétales</term>
<term>Résistance à la maladie</term>
<term>Solanum tuberosum</term>
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<keywords scheme="MESH" qualifier="immunologie" xml:lang="fr"><term>Immunité innée</term>
<term>Maladies des plantes</term>
<term>Solanum tuberosum</term>
</keywords>
<keywords scheme="MESH" qualifier="immunology" xml:lang="en"><term>Immunity, Innate</term>
<term>Plant Diseases</term>
<term>Solanum tuberosum</term>
</keywords>
<keywords scheme="MESH" qualifier="parasitologie" xml:lang="fr"><term>Maladies des plantes</term>
<term>Phytophthora infestans</term>
<term>Solanum tuberosum</term>
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<keywords scheme="MESH" qualifier="parasitology" xml:lang="en"><term>Phytophthora infestans</term>
<term>Plant Diseases</term>
<term>Solanum tuberosum</term>
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<keywords scheme="MESH" qualifier="physiologie" xml:lang="fr"><term>Papillons de nuit</term>
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<term>Chromosome Mapping</term>
<term>Phenotype</term>
<term>Polymorphism, Single Nucleotide</term>
<term>Quantitative Trait Loci</term>
<term>Tetraploidy</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Animaux</term>
<term>Cartographie chromosomique</term>
<term>Locus de caractère quantitatif</term>
<term>Phénotype</term>
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<front><div type="abstract" xml:lang="en">Late blight and Guatemalan potato tuber moth caused by Phytophthora infestans and Tecia solanivora, respectively, are major phytosanitary problems on potato crops in Colombia and Ecuador. Hence, the development of resistant cultivars is an alternative for their control. However, breeding initiatives for durable resistance using molecular tools are limited due to the genome complexity and high heterozygosity in autotetraploid potatoes. To contribute to a better understanding of the genetic basis underlying the resistance to P. infestans and T. solanivora in potato, the aim of this study was to identify QTLs for resistance to P. infestans and T. solanivora using a F1 tetraploid potato segregant population for both traits. Ninety-four individuals comprised this population. Parent genotypes and their progeny were genotyped using SOLCAP 12K potato array. Forty-five percent of the markers were polymorphic. A genetic linkage map was built with a length of 968.4 cM and 1,287 SNPs showing good distribution across the genome. Severity and incidence were evaluated in two crop cycles for two years. QTL analysis revealed six QTLs linked to P. infestans, four of these related to previous QTLs reported, and two novel QTLs (qrAUDPC-3 and qrAUDPC-8). Fifteen QTLs were linked to T. solanivora, being qIPC-6 and qOPA-6.1, and qIPC-10 and qIPC-10.1 stable in two different trials. This study is one of the first to identify QTLs for T. solanivora. As the population employed is a breeding population, results will contribute significantly to breeding programs to select resistant plant material, especially in countries where P. infestans and T. solanivora limit potato production.</div>
</front>
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<Title>PloS one</Title>
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<ArticleTitle>QTL analysis reveals quantitative resistant loci for Phytophthora infestans and Tecia solanivora in tetraploid potato (Solanum tuberosum L.).</ArticleTitle>
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<Abstract><AbstractText>Late blight and Guatemalan potato tuber moth caused by Phytophthora infestans and Tecia solanivora, respectively, are major phytosanitary problems on potato crops in Colombia and Ecuador. Hence, the development of resistant cultivars is an alternative for their control. However, breeding initiatives for durable resistance using molecular tools are limited due to the genome complexity and high heterozygosity in autotetraploid potatoes. To contribute to a better understanding of the genetic basis underlying the resistance to P. infestans and T. solanivora in potato, the aim of this study was to identify QTLs for resistance to P. infestans and T. solanivora using a F1 tetraploid potato segregant population for both traits. Ninety-four individuals comprised this population. Parent genotypes and their progeny were genotyped using SOLCAP 12K potato array. Forty-five percent of the markers were polymorphic. A genetic linkage map was built with a length of 968.4 cM and 1,287 SNPs showing good distribution across the genome. Severity and incidence were evaluated in two crop cycles for two years. QTL analysis revealed six QTLs linked to P. infestans, four of these related to previous QTLs reported, and two novel QTLs (qrAUDPC-3 and qrAUDPC-8). Fifteen QTLs were linked to T. solanivora, being qIPC-6 and qOPA-6.1, and qIPC-10 and qIPC-10.1 stable in two different trials. This study is one of the first to identify QTLs for T. solanivora. As the population employed is a breeding population, results will contribute significantly to breeding programs to select resistant plant material, especially in countries where P. infestans and T. solanivora limit potato production.</AbstractText>
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<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Santa</LastName>
<ForeName>Juan David</ForeName>
<Initials>JD</Initials>
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</AffiliationInfo>
<AffiliationInfo><Affiliation>Faculty of Agricultural Sciences, Universidad Nacional de Colombia, sede Bogotá, Colombia.</Affiliation>
</AffiliationInfo>
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<Author ValidYN="Y"><LastName>Berdugo-Cely</LastName>
<ForeName>Jhon</ForeName>
<Initials>J</Initials>
<Identifier Source="ORCID">0000-0003-4124-9243</Identifier>
<AffiliationInfo><Affiliation>Corporación Colombiana de Investigación Agropecuaria (AGROSAVIA), C.I. Tibaitatá, Cundinamarca, Colombia.</Affiliation>
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<Author ValidYN="Y"><LastName>Cely-Pardo</LastName>
<ForeName>Liliana</ForeName>
<Initials>L</Initials>
<AffiliationInfo><Affiliation>Corporación Colombiana de Investigación Agropecuaria (AGROSAVIA), C.I. Tibaitatá, Cundinamarca, Colombia.</Affiliation>
</AffiliationInfo>
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<Author ValidYN="Y"><LastName>Soto-Suárez</LastName>
<ForeName>Mauricio</ForeName>
<Initials>M</Initials>
<AffiliationInfo><Affiliation>Corporación Colombiana de Investigación Agropecuaria (AGROSAVIA), C.I. Tibaitatá, Cundinamarca, Colombia.</Affiliation>
</AffiliationInfo>
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<Author ValidYN="Y"><LastName>Mosquera</LastName>
<ForeName>Teresa</ForeName>
<Initials>T</Initials>
<AffiliationInfo><Affiliation>Faculty of Agricultural Sciences, Universidad Nacional de Colombia, sede Bogotá, Colombia.</Affiliation>
</AffiliationInfo>
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<Author ValidYN="Y"><LastName>Galeano M</LastName>
<ForeName>Carlos H</ForeName>
<Initials>CH</Initials>
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   |texte=   QTL analysis reveals quantitative resistant loci for Phytophthora infestans and Tecia solanivora in tetraploid potato (Solanum tuberosum L.).
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QTL analysis reveals quantitative resistant loci for Phytophthora infestans and Tecia solanivora in tetraploid potato (Solanum tuberosum L.).

QTL analysis reveals quantitative resistant loci for Phytophthora infestans and Tecia solanivora in tetraploid potato (Solanum tuberosum L.).

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